STRINGSTRING
RSAG_00848 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00848" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00848Uncharacterized protein (661 aa)    
Predicted Functional Partners:
RSAG_00847
Uncharacterized protein (409 aa)
 
          0.967
RSAG_00846
Uncharacterized protein (264 aa)
 
          0.966
RSAG_03304
Uncharacterized protein (788 aa)
   
          0.778
RSAG_02641
Uncharacterized protein (347 aa)
   
          0.778
RSAG_00105
Uncharacterized protein (285 aa)
   
          0.778
RSAG_02677
Uncharacterized protein (329 aa)
   
          0.776
RSAG_02948
Uncharacterized protein (134 aa)
   
          0.770
RSAG_02393
Uncharacterized protein (362 aa)
   
          0.769
RSAG_00236
Uncharacterized protein (169 aa)
   
          0.766
RSAG_02132
Uncharacterized protein (846 aa)
   
          0.763
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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