STRINGSTRING
RSAG_00857 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00857" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00857Uncharacterized protein (311 aa)    
Predicted Functional Partners:
RSAG_00712
Uncharacterized protein (265 aa)
   
   
    0.789
RSAG_01959
Uncharacterized protein (242 aa)
   
          0.777
RSAG_03441
Uncharacterized protein (255 aa)
   
          0.774
RSAG_01688
Uncharacterized protein (303 aa)
   
          0.774
RSAG_00858
Uncharacterized protein (404 aa)
 
          0.717
RSAG_01891
Uncharacterized protein (610 aa)
 
   
    0.697
RSAG_01542
Uncharacterized protein (601 aa)
 
   
    0.668
RSAG_02516
Uncharacterized protein (594 aa)
 
   
    0.666
RSAG_01843
Histidine kinase (599 aa)
 
   
    0.663
RSAG_02006
Uncharacterized protein (595 aa)
 
   
    0.663
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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