STRINGSTRING
RSAG_00880 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00880" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00880Uncharacterized protein (561 aa)    
Predicted Functional Partners:
RSAG_00881
Uncharacterized protein (63 aa)
              0.815
RSAG_00571
Uncharacterized protein (292 aa)
 
          0.710
RSAG_00885
Uncharacterized protein (280 aa)
       
    0.611
RSAG_00803
Uncharacterized protein (522 aa)
 
       
0.605
RSAG_02320
Uncharacterized protein (557 aa)
 
       
0.604
RSAG_03096
Uncharacterized protein (557 aa)
 
       
0.604
RSAG_02322
Uncharacterized protein (517 aa)
 
       
0.601
RSAG_03094
Uncharacterized protein (535 aa)
 
       
0.600
RSAG_01257
Uncharacterized protein (536 aa)
 
       
0.596
RSAG_02160
Toxin secretion/phage lysis holin (147 aa)
 
          0.594
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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