STRINGSTRING
RSAG_00888 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00888" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00888Uncharacterized protein (254 aa)    
Predicted Functional Partners:
RSAG_01578
Uncharacterized protein (110 aa)
   
          0.504
RSAG_04706
Uncharacterized protein (350 aa)
 
          0.502
RSAG_02621
Uncharacterized protein (242 aa)
   
          0.468
RSAG_01255
Uncharacterized protein (832 aa)
   
          0.453
RSAG_02050
Uncharacterized protein (319 aa)
   
          0.434
RSAG_00547
Uncharacterized protein (166 aa)
   
          0.431
RSAG_03108
Uncharacterized protein (172 aa)
   
          0.418
RSAG_00854
Uncharacterized protein (230 aa)
   
          0.410
RSAG_02814
Uncharacterized protein (487 aa)
   
          0.405
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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