STRINGSTRING
RSAG_00894 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00894" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00894Uncharacterized protein (145 aa)    
Predicted Functional Partners:
RSAG_00895
Uncharacterized protein (943 aa)
 
          0.886
RSAG_00227
Diguanylate cyclase (GGDEF) domain-containing protein (659 aa)
          0.875
RSAG_00896
Uncharacterized protein (955 aa)
 
          0.848
RSAG_02258
Uncharacterized protein (383 aa)
          0.790
RSAG_04618
Uncharacterized protein (985 aa)
   
          0.750
RSAG_00852
Uncharacterized protein (686 aa)
   
          0.711
RSAG_02930
Uncharacterized protein (927 aa)
   
          0.702
RSAG_01683
Diguanylate cyclase (GGDEF) domain-containing protein (855 aa)
   
          0.684
RSAG_03371
Uncharacterized protein (507 aa)
   
          0.607
RSAG_04620
Uncharacterized protein (726 aa)
   
          0.603
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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