STRINGSTRING
RSAG_00896 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00896" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00896Uncharacterized protein (955 aa)    
Predicted Functional Partners:
RSAG_00227
Diguanylate cyclase (GGDEF) domain-containing protein (659 aa)
  0.983
RSAG_01994
Uncharacterized protein (222 aa)
 
  0.886
RSAG_03190
Uncharacterized protein (247 aa)
   
  0.884
RSAG_00474
Uncharacterized protein (234 aa)
 
  0.884
RSAG_03422
Diguanylate cyclase (GGDEF) domain-containing protein (349 aa)
  0.877
RSAG_01249
Uncharacterized protein (234 aa)
 
  0.875
RSAG_00750
Stage 0 sporulation protein A homolog ; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process (268 aa)
 
  0.861
RSAG_02433
Uncharacterized protein (229 aa)
 
  0.860
RSAG_01816
Uncharacterized protein (224 aa)
 
  0.853
RSAG_00578
Uncharacterized protein (233 aa)
0.853
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
Server load: low (8%) [HD]