STRINGSTRING
RSAG_00909 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00909" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00909Uncharacterized protein (241 aa)    
Predicted Functional Partners:
RSAG_02312
Uncharacterized protein (289 aa)
   
          0.763
RSAG_00908
Uncharacterized protein (311 aa)
              0.691
RSAG_01703
Uncharacterized protein (288 aa)
   
          0.656
RSAG_02926
Uncharacterized protein (300 aa)
   
          0.634
RSAG_02548
Uncharacterized protein (302 aa)
   
          0.583
RSAG_02474
Uncharacterized protein (294 aa)
   
          0.579
RSAG_03388
Uncharacterized protein (311 aa)
 
     
  0.570
RSAG_02886
Uncharacterized protein (292 aa)
   
          0.556
RSAG_02586
Uncharacterized protein (300 aa)
   
          0.550
RSAG_03009
Uncharacterized protein (393 aa)
   
 
  0.518
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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