STRINGSTRING
RSAG_00925 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00925" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00925Uncharacterized protein (126 aa)    
Predicted Functional Partners:
RSAG_00924
DAK2 domain fusion protein YloV (548 aa)
 
     
  0.974
RSAG_00504
DegV family EDD domain-containing protein (290 aa)
 
          0.798
RSAG_02922
DegV family EDD domain-containing protein (289 aa)
 
          0.782
rpmB
50S ribosomal protein L28 (82 aa)
              0.775
RSAG_00376
HAD phosphatase, family IIIA (167 aa)
   
          0.667
RSAG_01726
DegV family EDD domain-containing protein (279 aa)
 
          0.655
RSAG_02943
UPF0297 protein RSAG_02943 (93 aa)
 
     
  0.617
plsX
Phosphate-acyl-ACP acyltransferase ; Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA (352 aa)
 
        0.541
RSAG_02551
L-serine dehydratase, iron-sulfur-dependent, beta subunit (222 aa)
 
          0.514
argR
Arginine repressor ; Regulates arginine biosynthesis genes (152 aa)
 
          0.514
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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