STRINGSTRING
RSAG_00945 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00945" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00945Uncharacterized protein (215 aa)    
Predicted Functional Partners:
RSAG_00947
Amino acid adenylation domain-containing protein (2996 aa)
 
     
  0.965
RSAG_00946
Anti-sigma factor antagonist (100 aa)
 
          0.869
RSAG_00948
MATE efflux family protein (581 aa)
 
        0.801
RSAG_03461
Amino acid adenylation domain-containing protein (515 aa)
 
 
 
  0.775
RSAG_03103
Amino acid adenylation domain-containing protein (491 aa)
 
     
  0.763
RSAG_02529
Uncharacterized protein (462 aa)
     
 
  0.647
RSAG_01202
Acyl carrier protein ; Carrier of the growing fatty acid chain in fatty acid biosynthesis (77 aa)
   
 
  0.575
RSAG_00782
Acyl carrier protein ; Carrier of the growing fatty acid chain in fatty acid biosynthesis (77 aa)
   
 
  0.575
RSAG_00949
Uncharacterized protein (519 aa)
              0.500
RSAG_00772
Uncharacterized protein (183 aa)
   
   
 
0.471
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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