STRINGSTRING
RSAG_00952 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00952" - No annotation available in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00952No annotation available (154 aa)    
Predicted Functional Partners:
RSAG_00473
Histidine kinase (425 aa)
   
          0.544
RSAG_03398
Uncharacterized protein (1584 aa)
   
          0.516
RSAG_02537
Uncharacterized protein (150 aa)
   
          0.483
RSAG_03367
Uncharacterized protein (576 aa)
   
          0.459
RSAG_02528
Acyl carrier protein (76 aa)
   
          0.437
RSAG_02529
Uncharacterized protein (462 aa)
   
          0.425
RSAG_00951
Endonuclease IV ; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5’-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin (278 aa)
              0.424
RSAG_00351
Uncharacterized protein (342 aa)
   
          0.424
RSAG_01717
Uncharacterized protein (157 aa)
   
          0.421
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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