STRINGSTRING
RSAG_00953 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00953" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00953Uncharacterized protein (235 aa)    
Predicted Functional Partners:
RSAG_00547
Uncharacterized protein (166 aa)
   
          0.720
RSAG_01368
Uncharacterized protein (432 aa)
   
          0.688
RSAG_00576
Uncharacterized protein (277 aa)
   
          0.678
RSAG_01317
Uncharacterized protein (327 aa)
   
          0.634
RSAG_00954
Uncharacterized protein (43 aa)
              0.582
RSAG_01584
No annotation available (80 aa)
   
          0.572
RSAG_01683
Diguanylate cyclase (GGDEF) domain-containing protein (855 aa)
   
          0.555
RSAG_00955
Uncharacterized protein (563 aa)
              0.555
RSAG_01696
Uncharacterized protein (134 aa)
   
          0.541
RSAG_00572
Uncharacterized protein (320 aa)
   
          0.508
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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