STRINGSTRING
RSAG_00955 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00955" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00955Uncharacterized protein (563 aa)    
Predicted Functional Partners:
RSAG_00954
Uncharacterized protein (43 aa)
              0.815
RSAG_03304
Uncharacterized protein (788 aa)
   
          0.627
RSAG_00953
Uncharacterized protein (235 aa)
              0.555
RSAG_03326
Uncharacterized protein (291 aa)
   
          0.515
RSAG_00956
Uncharacterized protein (251 aa)
              0.495
RSAG_00957
Uncharacterized protein (897 aa)
              0.478
RSAG_02945
Uncharacterized protein (85 aa)
   
          0.428
RSAG_00784
X-X-X-Leu-X-X-Gly heptad repeat protein (1004 aa)
   
          0.417
xseB
Exodeoxyribonuclease VII small subunit ; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides (79 aa)
   
          0.415
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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