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panD protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"panD" - Aspartate alpha-decarboxylase in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
panDAspartate alpha-decarboxylase ; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine (130 aa)    
Predicted Functional Partners:
panC
Pantoate-activating enzyme ; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate (279 aa)
 
  0.994
RSAG_02155
Uncharacterized protein (429 aa)
   
 
  0.871
RSAG_03473
Uncharacterized protein (519 aa)
       
  0.762
RSAG_02207
Uncharacterized protein (395 aa)
       
  0.762
pyrB
Aspartate transcarbamylase (303 aa)
         
  0.761
purA
IMP--aspartate ligase ; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (426 aa)
       
    0.748
argG
Citrulline--aspartate ligase (408 aa)
     
 
    0.743
RSAG_00959
Bile acid transporter (327 aa)
              0.743
RSAG_03389
Aspartate ammonia-lyase (480 aa)
         
  0.742
RSAG_01945
Uncharacterized protein (480 aa)
         
  0.740
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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