STRINGSTRING
RSAG_00965 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00965" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00965Uncharacterized protein (705 aa)    
Predicted Functional Partners:
RSAG_00964
Uncharacterized protein (217 aa)
   
        0.892
RSAG_00547
Uncharacterized protein (166 aa)
   
          0.717
RSAG_01887
Uncharacterized protein (369 aa)
   
          0.554
RSAG_00966
Uncharacterized protein (406 aa)
              0.453
RSAG_03499
Uncharacterized protein (424 aa)
   
          0.449
RSAG_02020
Uncharacterized protein (273 aa)
   
          0.435
RSAG_01886
Uncharacterized protein (418 aa)
   
          0.411
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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