STRINGSTRING
RSAG_01005 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01005" - No annotation available in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01005No annotation available (403 aa)    
Predicted Functional Partners:
RSAG_04683
Uncharacterized protein (472 aa)
          0.958
RSAG_01004
Uncharacterized protein (291 aa)
              0.783
RSAG_02727
Uncharacterized protein (397 aa)
   
          0.730
fcl
GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase ; Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction (314 aa)
   
        0.703
RSAG_00182
Threonine synthase (496 aa)
   
   
    0.654
RSAG_03386
Uncharacterized protein (493 aa)
         
  0.628
RSAG_04685
Uncharacterized protein (576 aa)
       
    0.548
gmd
GDP-D-mannose dehydratase ; Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose (350 aa)
              0.506
RSAG_02771
Uncharacterized protein (579 aa)
   
          0.484
RSAG_02803
Uncharacterized protein (702 aa)
   
        0.480
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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