STRINGSTRING
RSAG_04683 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_04683" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_04683Uncharacterized protein (472 aa)    
Predicted Functional Partners:
RSAG_01005
No annotation available (403 aa)
          0.958
RSAG_00993
Uncharacterized protein (320 aa)
 
          0.928
RSAG_03488
Uncharacterized protein (318 aa)
   
          0.692
RSAG_00350
Uncharacterized protein (324 aa)
   
   
    0.671
RSAG_01776
Uncharacterized protein (389 aa)
   
   
    0.647
RSAG_02727
Uncharacterized protein (397 aa)
   
          0.635
RSAG_02771
Uncharacterized protein (579 aa)
   
          0.618
fcl
GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase ; Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction (314 aa)
   
        0.604
RSAG_00669
Uncharacterized protein (99 aa)
   
          0.490
RSAG_01008
Uncharacterized protein (301 aa)
              0.483
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
Server load: low (8%) [HD]