STRINGSTRING
RSAG_01016 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01016" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01016Uncharacterized protein (388 aa)    
Predicted Functional Partners:
RSAG_01014
Uncharacterized protein (395 aa)
 
          0.934
RSAG_01015
Uncharacterized protein (473 aa)
   
        0.917
RSAG_01022
Uncharacterized protein (355 aa)
 
        0.719
RSAG_01019
Uncharacterized protein (377 aa)
 
        0.691
RSAG_02123
dTDP-4-dehydrorhamnose 3,5-epimerase (184 aa)
       
    0.685
RSAG_01009
dTDP-4-dehydrorhamnose 3,5-epimerase (202 aa)
       
    0.685
RSAG_01018
Uncharacterized protein (387 aa)
 
          0.670
RSAG_01024
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (484 aa)
 
        0.642
RSAG_01017
Uncharacterized protein (415 aa)
              0.642
RSAG_02114
Uncharacterized protein (318 aa)
 
          0.632
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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