STRINGSTRING
RSAG_01030 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01030" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01030Uncharacterized protein (248 aa)    
Predicted Functional Partners:
RSAG_01029
Uncharacterized protein (259 aa)
 
 
  0.981
RSAG_01024
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (484 aa)
 
   
  0.816
RSAG_01663
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (466 aa)
 
   
  0.759
RSAG_02113
Undecaprenyl-phosphate glucose phosphotransferase (467 aa)
 
   
  0.747
RSAG_02885
Iron-sulfur cluster carrier protein ; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP (276 aa)
   
   
  0.596
RSAG_02123
dTDP-4-dehydrorhamnose 3,5-epimerase (184 aa)
   
   
  0.557
RSAG_01009
dTDP-4-dehydrorhamnose 3,5-epimerase (202 aa)
   
   
  0.557
RSAG_01019
Uncharacterized protein (377 aa)
 
        0.544
RSAG_01031
Ribosomal protein S1 (358 aa)
              0.536
RSAG_01027
Uncharacterized protein (322 aa)
 
     
  0.533
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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