STRINGSTRING
RSAG_01033 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01033" - HI0933 family flavoprotein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01033HI0933 family flavoprotein (431 aa)    
Predicted Functional Partners:
RSAG_00648
Uncharacterized protein (636 aa)
 
          0.494
RSAG_00234
No annotation available (323 aa)
     
      0.490
RSAG_00495
Pseudouridine synthase (255 aa)
     
      0.490
RSAG_01034
Uncharacterized protein (470 aa)
              0.482
xseA
Exodeoxyribonuclease VII large subunit ; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides (393 aa)
   
        0.474
RSAG_00728
Uncharacterized protein (456 aa)
   
        0.466
RSAG_00140
Uncharacterized protein (531 aa)
   
        0.466
RSAG_01291
Uncharacterized protein (187 aa)
   
        0.447
RSAG_00757
Uncharacterized protein (295 aa)
   
        0.447
RSAG_03300
Uncharacterized protein (302 aa)
              0.438
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
Server load: low (9%) [HD]