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gmk protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"gmk" - GMP kinase in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gmkGMP kinase ; Essential for recycling GMP and indirectly, cGMP (207 aa)    
Predicted Functional Partners:
RSAG_02897
Uncharacterized protein (671 aa)
 
  0.950
RSAG_01085
TIGR00255 family protein (293 aa)
 
   
  0.919
RSAG_01084
UPF0296 protein RSAG_01084 (90 aa)
              0.914
guaA
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (525 aa)
     
 
  0.912
RSAG_04674
Uncharacterized protein (386 aa)
 
  0.870
xpt
Xanthine phosphoribosyltransferase ; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5’-monophosphate (XMP), so it can be reused for RNA or DNA synthesis (190 aa)
   
 
  0.858
RSAG_02378
Uncharacterized protein (727 aa)
 
  0.855
RSAG_01498
Uncharacterized protein (635 aa)
 
  0.854
apt
Adenine phosphoribosyltransferase ; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis (174 aa)
   
 
  0.851
RSAG_02581
Pyruvate kinase (472 aa)
   
  0.851
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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