STRINGSTRING
RSAG_01128 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01128" - Phage tail tape measure protein, TP901 family, core region in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01128Phage tail tape measure protein, TP901 family, core region (1445 aa)    
Predicted Functional Partners:
RSAG_01127
Uncharacterized protein (233 aa)
 
          0.894
RSAG_01122
Uncharacterized protein (376 aa)
 
        0.865
RSAG_01132
Uncharacterized protein (469 aa)
   
          0.759
RSAG_00028
Uncharacterized protein (540 aa)
   
          0.684
RSAG_00635
Uncharacterized protein (546 aa)
   
          0.671
RSAG_01111
Uncharacterized protein (425 aa)
   
          0.594
RSAG_04669
Uncharacterized protein (473 aa)
 
          0.579
RSAG_01797
Uncharacterized protein (506 aa)
   
          0.502
RSAG_01126
Uncharacterized protein (348 aa)
              0.485
RSAG_00229
Uncharacterized protein (196 aa)
   
          0.480
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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