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RSAG_01176 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01176" - Exonuclease SbcCD, D subunit in Ruminococcus sp. 5139BFAA
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
RSAG_01176Exonuclease SbcCD, D subunit (1275 aa)    
Predicted Functional Partners:
RSAG_01228
DNA polymerase I (849 aa)
   
  0.997
recA
Recombinase A ; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (354 aa)
   
  0.995
RSAG_02599
ATP-dependent DNA helicase RecQ (629 aa)
   
  0.991
sbcC
Nuclease SbcCD subunit C ; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3’->5’ double strand exonuclease that can open hairpins. It also has a 5’ single-strand endonuclease activity (1117 aa)
 
0.981
sbcD
Nuclease SbcCD subunit D ; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3’->5’ double strand exonuclease that can open hairpins. It also has a 5’ single-strand endonuclease activity (387 aa)
 
0.981
RSAG_02652
Uncharacterized protein (350 aa)
   
  0.975
topA
DNA topoisomerase I ; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (689 aa)
   
  0.960
RSAG_00715
DNA topoisomerase (734 aa)
   
  0.960
RSAG_01200
No annotation available (243 aa)
   
  0.959
smc
Chromosome partition protein Smc ; Required for chromosome condensation and partitioning (943 aa)
   
  0.959
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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