STRINGSTRING
RSAG_01189 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01189" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01189Uncharacterized protein (581 aa)    
Predicted Functional Partners:
RSAG_01228
DNA polymerase I (849 aa)
       
 
  0.534
RSAG_01188
No annotation available (30 aa)
              0.524
RSAG_01260
Uncharacterized protein (249 aa)
 
          0.502
RSAG_02736
Uncharacterized protein (292 aa)
         
  0.468
RSAG_02284
Uncharacterized protein (370 aa)
         
  0.468
RSAG_02212
Uncharacterized protein (377 aa)
         
  0.468
RSAG_01978
Uncharacterized protein (314 aa)
         
  0.468
RSAG_01128
Phage tail tape measure protein, TP901 family, core region (1445 aa)
   
        0.440
RSAG_00552
Uncharacterized protein (79 aa)
              0.433
RSAG_02517
Uncharacterized protein (392 aa)
   
          0.427
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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