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RSAG_01193 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01193" - UPF0109 protein RSAG_01193 in Ruminococcus sp. 5139BFAA
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
RSAG_01193UPF0109 protein RSAG_01193 (76 aa)    
Predicted Functional Partners:
rpsP
30S ribosomal protein S16 (81 aa)
   
        0.738
trmD
tRNA [GM37] methyltransferase ; Specifically methylates guanosine-37 in various tRNAs (252 aa)
   
        0.736
rimM
Ribosome maturation factor RimM ; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes (167 aa)
   
        0.722
RSAG_03313
Uncharacterized protein (310 aa)
   
      0.693
RSAG_01196
UPF0122 protein RSAG_01196 ; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein (107 aa)
              0.668
ffh
Fifty-four homolog ; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY (451 aa)
              0.668
ftsY
Signal recognition particle receptor FtsY ; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) (316 aa)
              0.552
smc
Chromosome partition protein Smc ; Required for chromosome condensation and partitioning (943 aa)
              0.552
queA
Queuosine biosynthesis protein QueA ; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) (341 aa)
              0.547
RSAG_01200
No annotation available (243 aa)
              0.546
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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