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RSAG_01196 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01196" - UPF0122 protein RSAG_01196 in Ruminococcus sp. 5139BFAA
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
RSAG_01196UPF0122 protein RSAG_01196 ; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein (107 aa)    
Predicted Functional Partners:
ffh
Fifty-four homolog ; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY (451 aa)
         
  0.890
rpsP
30S ribosomal protein S16 (81 aa)
              0.727
RSAG_02943
UPF0297 protein RSAG_02943 (93 aa)
   
     
  0.690
whiA
Putative sporulation transcription regulator WhiA ; May be required for sporulation (319 aa)
   
          0.681
codY
GTP-sensing transcriptional pleiotropic repressor CodY ; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor (261 aa)
   
          0.680
smc
Chromosome partition protein Smc ; Required for chromosome condensation and partitioning (943 aa)
 
          0.677
RSAG_01193
UPF0109 protein RSAG_01193 (76 aa)
              0.668
ftsY
Signal recognition particle receptor FtsY ; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) (316 aa)
         
  0.663
rimM
Ribosome maturation factor RimM ; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes (167 aa)
 
          0.653
RSAG_03046
Uncharacterized protein (91 aa)
 
          0.627
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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