Genes that are sometimes fused into single open reading frames.
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
UPF0237 protein RSAG_01225 (90 aa)
Predicted Functional Partners:
UPF0210 protein RSAG_01224 (454 aa)
DNA polymerase I (849 aa)
Dephosphocoenzyme A kinase ; Catalyzes the phosphorylation of the 3’-hydroxyl group of dephosphocoenzyme A to form coenzyme A (199 aa)
Uncharacterized protein (264 aa)
Phosphohydroxythreonine aminotransferase ; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine (360 aa)
Inosine-5’-monophosphate dehydrogenase (485 aa)
Uncharacterized protein (141 aa)
Threonine dehydratase (403 aa)
Diaminopropionate ammonia-lyase (409 aa)
Cysteine synthase (309 aa)
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412 Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA