STRINGSTRING
RSAG_01225 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01225" - UPF0237 protein RSAG_01225 in Ruminococcus sp. 5139BFAA
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01225UPF0237 protein RSAG_01225 (90 aa)    
Predicted Functional Partners:
RSAG_01224
UPF0210 protein RSAG_01224 (454 aa)
 
          0.937
RSAG_01228
DNA polymerase I (849 aa)
              0.889
coaE
Dephosphocoenzyme A kinase ; Catalyzes the phosphorylation of the 3’-hydroxyl group of dephosphocoenzyme A to form coenzyme A (199 aa)
              0.843
RSAG_01226
Uncharacterized protein (264 aa)
              0.843
serC
Phosphohydroxythreonine aminotransferase ; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine (360 aa)
         
  0.613
RSAG_01855
Inosine-5’-monophosphate dehydrogenase (485 aa)
     
 
    0.613
RSAG_02364
Uncharacterized protein (141 aa)
     
 
    0.611
RSAG_01197
Threonine dehydratase (403 aa)
   
 
    0.611
RSAG_00191
Diaminopropionate ammonia-lyase (409 aa)
   
 
    0.611
RSAG_02352
Cysteine synthase (309 aa)
     
 
    0.610
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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