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RSAG_01234 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01234" - Diaminopimelate decarboxylase in Ruminococcus sp. 5139BFAA
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01234Diaminopimelate decarboxylase (426 aa)    
Predicted Functional Partners:
RSAG_02238
Aspartokinase (402 aa)
 
  0.979
RSAG_01747
Aspartokinase (439 aa)
 
  0.976
dapA
4-hydroxy-tetrahydrodipicolinate synthase ; Catalyzes the condensation of (S)-aspartate-beta- semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) (297 aa)
   
  0.974
RSAG_02360
Diaminopimelate epimerase (151 aa)
   
 
  0.944
dapF
Diaminopimelate epimerase ; Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan (284 aa)
   
 
  0.944
RSAG_02994
Aspartate-semialdehyde dehydrogenase (361 aa)
   
 
  0.915
RSAG_02237
Homoserine dehydrogenase (404 aa)
   
 
  0.876
RSAG_00725
Homoserine dehydrogenase (431 aa)
   
 
  0.876
argH
Arginosuccinase (459 aa)
   
 
  0.861
RSAG_03393
Uncharacterized protein (426 aa)
   
 
  0.856
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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