STRINGSTRING
RSAG_01239 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01239" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01239Uncharacterized protein (355 aa)    
Predicted Functional Partners:
RSAG_03387
Xylulokinase (485 aa)
       
    0.685
RSAG_01755
Rhamnulokinase (466 aa)
 
   
    0.661
RSAG_02948
Uncharacterized protein (134 aa)
 
          0.636
RSAG_02745
Glucosamine-6-phosphate deaminase (247 aa)
     
 
  0.615
RSAG_03402
Uncharacterized protein (534 aa)
       
    0.614
RSAG_01545
Dihydroxy-acid dehydratase (581 aa)
         
  0.610
ilvD
Dihydroxy-acid dehydratase (557 aa)
         
  0.610
RSAG_02803
Uncharacterized protein (702 aa)
     
 
    0.601
fcl
GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase ; Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction (314 aa)
     
 
    0.601
RSAG_02243
Uncharacterized protein (107 aa)
   
          0.483
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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