STRINGSTRING
RSAG_01251 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01251" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01251Uncharacterized protein (215 aa)    
Predicted Functional Partners:
RSAG_01252
TrkH family potassium uptake protein (445 aa)
 
 
  0.992
RSAG_03180
TrkH family potassium uptake protein (460 aa)
 
 
  0.963
RSAG_01250
Uncharacterized protein (541 aa)
         
  0.901
RSAG_01249
Uncharacterized protein (234 aa)
         
  0.900
RSAG_00834
TrkH family potassium uptake protein (479 aa)
   
 
  0.751
RSAG_01248
No annotation available (59 aa)
              0.680
RSAG_00406
PTS system, Fru family, IIC component (637 aa)
       
 
  0.674
RSAG_02461
Uncharacterized protein (467 aa)
   
        0.557
RSAG_02375
Ribosomal RNA small subunit methyltransferase B (450 aa)
   
        0.557
RSAG_01740
RNA methyltransferase, TrmH family, group 3 (245 aa)
 
          0.513
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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