STRINGSTRING
RSAG_01258 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01258" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01258Uncharacterized protein (62 aa)    
Predicted Functional Partners:
RSAG_01259
Uncharacterized protein (285 aa)
 
          0.980
RSAG_01260
Uncharacterized protein (249 aa)
 
          0.980
RSAG_01261
Uncharacterized protein (541 aa)
 
          0.921
RSAG_01257
Uncharacterized protein (536 aa)
 
          0.904
RSAG_01262
Uncharacterized protein (141 aa)
 
          0.890
RSAG_01809
Uncharacterized protein (261 aa)
 
          0.856
RSAG_01264
Uncharacterized protein (70 aa)
   
          0.778
RSAG_01265
Sigma-70 family RNA polymerase sigma factor (147 aa)
   
          0.774
RSAG_00551
Uncharacterized protein (271 aa)
 
          0.745
RSAG_00552
Uncharacterized protein (79 aa)
 
          0.647
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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