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RSAG_01273 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01273" - TIGR04100 family radical SAM enzyme in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01273TIGR04100 family radical SAM enzyme (201 aa)    
Predicted Functional Partners:
RSAG_01642
TatD family hydrolase (263 aa)
            0.940
RSAG_01274
TIGR04002 family protein (178 aa)
 
          0.897
RSAG_01242
Uroporphyrinogen-III C-methyltransferase (501 aa)
   
 
  0.778
RSAG_01275
Pyridoxal kinase (277 aa)
 
          0.668
RSAG_02607
Uncharacterized protein (152 aa)
   
 
  0.664
RSAG_01226
Uncharacterized protein (264 aa)
   
   
  0.519
RSAG_00521
Protein-export membrane protein SecD ; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA (802 aa)
         
  0.469
RSAG_01272
Uncharacterized protein (94 aa)
              0.457
RSAG_01271
No annotation available (102 aa)
              0.453
RSAG_01646
Methionine--tRNA ligase ; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (652 aa)
              0.439
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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