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RSAG_01300 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01300" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01300Uncharacterized protein (223 aa)    
Predicted Functional Partners:
RSAG_00192
M20/DapE family protein YgeY (436 aa)
 
          0.843
RSAG_00191
Diaminopropionate ammonia-lyase (409 aa)
 
          0.792
RSAG_00202
Uncharacterized protein (999 aa)
 
          0.764
RSAG_00193
Uncharacterized protein (397 aa)
 
          0.761
RSAG_00203
Uncharacterized protein (443 aa)
 
          0.756
RSAG_00092
Uncharacterized protein (124 aa)
 
   
  0.577
RSAG_01299
Dihydropyrimidinase (461 aa)
 
          0.470
RSAG_01301
Uncharacterized protein (422 aa)
              0.439
RSAG_02535
UPF0597 protein RSAG_02535 (425 aa)
              0.438
RSAG_01197
Threonine dehydratase (403 aa)
              0.438
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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