STRINGSTRING
RSAG_01309 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01309" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01309Uncharacterized protein (316 aa)    
Predicted Functional Partners:
RSAG_01308
No annotation available (73 aa)
              0.638
RSAG_04656
Uncharacterized protein (317 aa)
              0.595
RSAG_00346
Uncharacterized protein (257 aa)
     
        0.455
RSAG_00343
Uncharacterized protein (614 aa)
     
        0.455
RSAG_01923
Uncharacterized protein (390 aa)
         
  0.444
RSAG_02944
Putative pre-16S rRNA nuclease ; Could be a nuclease involved in processing of the 5’-end of pre-16S rRNA (140 aa)
              0.438
RSAG_01093
Uncharacterized protein (329 aa)
              0.438
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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