STRINGSTRING
RSAG_01324 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01324" - IS605 OrfB family transposase in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01324IS605 OrfB family transposase (397 aa)    
Predicted Functional Partners:
RSAG_01325
No annotation available (56 aa)
 
          0.743
RSAG_00150
Uncharacterized protein (223 aa)
 
     
  0.728
RSAG_03501
Uncharacterized protein (139 aa)
 
          0.713
RSAG_02263
IS605 OrfB family transposase (379 aa)
   
          0.685
RSAG_01323
Peptide deformylase ; Removes the formyl group from the N-terminal Met of newly synthesized proteins (136 aa)
              0.494
RSAG_02782
Uncharacterized protein (111 aa)
   
          0.481
RSAG_01322
Uncharacterized protein (125 aa)
              0.465
RSAG_01321
UPF0178 protein RSAG_01321 (151 aa)
              0.456
RSAG_00903
No annotation available (106 aa)
   
          0.447
RSAG_02329
Uncharacterized protein (555 aa)
   
          0.430
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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