STRINGSTRING
RSAG_01333 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01333" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01333Uncharacterized protein (125 aa)    
Predicted Functional Partners:
RSAG_01355
Uncharacterized protein (1517 aa)
     
  0.993
trpB
Tryptophan synthase beta chain ; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine (394 aa)
     
    0.835
RSAG_00212
Pyruvate-flavodoxin oxidoreductase ; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1178 aa)
       
  0.829
RSAG_01334
Uncharacterized protein (235 aa)
   
 
  0.826
RSAG_01794
Uncharacterized protein (169 aa)
 
   
  0.799
RSAG_01038
Uncharacterized protein (478 aa)
   
 
  0.797
RSAG_00517
Uncharacterized protein (209 aa)
   
 
  0.780
RSAG_02219
Aldehyde-alcohol dehydrogenase (885 aa)
   
 
  0.775
RSAG_03019
Acetyl-CoA carboxylase, biotin carboxyl carrier protein (145 aa)
       
  0.770
RSAG_01036
Uncharacterized protein (122 aa)
       
  0.770
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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