STRINGSTRING
RSAG_01344 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01344" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01344Uncharacterized protein (184 aa)    
Predicted Functional Partners:
RSAG_01345
Glutamine synthetase, type I (440 aa)
 
          0.743
RSAG_00929
Uncharacterized protein (327 aa)
   
          0.717
RSAG_02138
Uncharacterized protein (144 aa)
   
          0.703
RSAG_02083
Uncharacterized protein (57 aa)
   
          0.691
RSAG_00532
Uncharacterized protein (316 aa)
   
          0.625
RSAG_00263
Uncharacterized protein (225 aa)
   
          0.615
RSAG_00065
Uncharacterized protein (136 aa)
   
          0.600
RSAG_01343
Aspartate-tRNA ligase (448 aa)
 
          0.567
RSAG_03224
Uncharacterized protein (76 aa)
   
          0.552
RSAG_02945
Uncharacterized protein (85 aa)
   
          0.552
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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