STRINGSTRING
RSAG_01395 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01395" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01395Uncharacterized protein (154 aa)    
Predicted Functional Partners:
RSAG_01394
Uncharacterized protein (275 aa)
 
  0.974
RSAG_01396
Uncharacterized protein (144 aa)
 
   
    0.969
RSAG_00406
PTS system, Fru family, IIC component (637 aa)
 
 
  0.962
RSAG_01398
Uncharacterized protein (325 aa)
 
          0.944
RSAG_02133
HPr family phosphocarrier (87 aa)
 
  0.916
RSAG_02841
HPr family phosphocarrier (84 aa)
   
  0.905
RSAG_01393
HPr family phosphocarrier (85 aa)
   
  0.905
RSAG_00506
HPr family phosphocarrier (85 aa)
   
  0.905
RSAG_00405
HPr family phosphocarrier (90 aa)
   
  0.905
RSAG_01397
HAD hydrolase, family IA (228 aa)
              0.859
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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