STRINGSTRING
RSAG_01418 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01418" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01418Uncharacterized protein (449 aa)    
Predicted Functional Partners:
RSAG_01242
Uroporphyrinogen-III C-methyltransferase (501 aa)
   
 
  0.778
RSAG_02607
Uncharacterized protein (152 aa)
   
 
  0.664
RSAG_01419
Uncharacterized protein (193 aa)
              0.655
RSAG_01226
Uncharacterized protein (264 aa)
   
   
  0.519
RSAG_01420
Uncharacterized protein (185 aa)
 
          0.496
RSAG_00521
Protein-export membrane protein SecD ; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA (802 aa)
         
  0.469
RSAG_03273
Uncharacterized protein (79 aa)
         
    0.463
RSAG_01417
Uncharacterized protein (548 aa)
              0.463
RSAG_01416
Uncharacterized protein (483 aa)
              0.463
hemL
Glutamate-1-semialdehyde aminotransferase (425 aa)
         
  0.445
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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