STRINGSTRING
RSAG_01420 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01420" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01420Uncharacterized protein (185 aa)    
Predicted Functional Partners:
RSAG_01831
Uncharacterized protein (661 aa)
 
          0.796
RSAG_01419
Uncharacterized protein (193 aa)
 
          0.612
RSAG_02780
Uncharacterized protein (192 aa)
   
          0.561
RSAG_00785
Uncharacterized protein (696 aa)
 
          0.557
RSAG_00784
X-X-X-Leu-X-X-Gly heptad repeat protein (1004 aa)
 
          0.549
RSAG_01607
Lantibiotic protection ABC transporter, ATP-binding subunit (234 aa)
 
   
  0.539
RSAG_00462
Uncharacterized protein (215 aa)
 
   
  0.505
RSAG_01421
Uncharacterized protein (921 aa)
              0.497
RSAG_01418
Uncharacterized protein (449 aa)
 
          0.496
RSAG_00361
Uncharacterized protein (1414 aa)
         
  0.492
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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