STRINGSTRING
crcB protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"crcB" - Putative fluoride ion transporter CrcB in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crcBPutative fluoride ion transporter CrcB ; Important for reducing fluoride concentration in the cell, thus reducing its toxicity (121 aa)    
Predicted Functional Partners:
tsaD
tRNA threonylcarbamoyladenosine biosynthesis protein TsaD ; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction (339 aa)
     
      0.856
RSAG_01733
Phosphoglycolate phosphatase, bacterial (221 aa)
     
      0.658
RSAG_00500
HAD hydrolase, family IA (215 aa)
     
      0.658
RSAG_01466
Uncharacterized protein (326 aa)
              0.634
RSAG_01468
Uncharacterized protein (153 aa)
              0.616
RSAG_03453
Uncharacterized protein (269 aa)
     
      0.490
RSAG_00826
Uncharacterized protein (463 aa)
     
      0.490
RSAG_00177
Uncharacterized protein (878 aa)
     
      0.490
RSAG_01469
Uncharacterized protein (221 aa)
              0.454
RSAG_01390
Uncharacterized protein (233 aa)
   
        0.447
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
Server load: low (8%) [HD]