STRINGSTRING
RSAG_01480 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01480" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01480Uncharacterized protein (203 aa)    
Predicted Functional Partners:
RSAG_01478
Site-specific DNA-methyltransferase (adenine-specific) (645 aa)
 
     
  0.937
RSAG_01477
Uncharacterized protein (596 aa)
 
          0.823
lon
ATP-dependent protease La ; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner (770 aa)
         
  0.621
RSAG_00701
Uncharacterized protein (496 aa)
         
  0.621
RSAG_01482
Uncharacterized protein (486 aa)
 
          0.597
RSAG_01479
Uncharacterized protein (72 aa)
              0.566
RSAG_04527
Uncharacterized protein (704 aa)
              0.537
rnhB
Ribonuclease HII ; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (251 aa)
     
      0.491
RSAG_01481
Uncharacterized protein (124 aa)
              0.469
RSAG_02712
Uncharacterized protein (267 aa)
   
          0.466
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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