STRINGSTRING
RSAG_01485 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01485" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01485Uncharacterized protein (359 aa)    
Predicted Functional Partners:
RSAG_00321
Uncharacterized protein (329 aa)
 
          0.873
RSAG_01482
Uncharacterized protein (486 aa)
 
          0.662
RSAG_01484
Uncharacterized protein (79 aa)
              0.648
RSAG_01487
Uncharacterized protein (63 aa)
 
          0.639
RSAG_03191
Uncharacterized protein (214 aa)
   
          0.626
RSAG_01477
Uncharacterized protein (596 aa)
 
          0.616
RSAG_02614
Uncharacterized protein (144 aa)
   
          0.557
RSAG_01486
Uncharacterized protein (350 aa)
 
          0.524
RSAG_01478
Site-specific DNA-methyltransferase (adenine-specific) (645 aa)
 
          0.505
RSAG_02086
Uncharacterized protein (184 aa)
   
          0.492
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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