STRINGSTRING
RSAG_01488 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01488" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01488Uncharacterized protein (177 aa)    
Predicted Functional Partners:
RSAG_01487
Uncharacterized protein (63 aa)
 
          0.888
RSAG_01486
Uncharacterized protein (350 aa)
 
          0.877
RSAG_01482
Uncharacterized protein (486 aa)
 
          0.782
RSAG_03144
Uncharacterized protein (441 aa)
   
          0.646
RSAG_00904
Uncharacterized protein (347 aa)
   
          0.635
RSAG_01352
Uncharacterized protein (92 aa)
   
          0.633
RSAG_01614
Uncharacterized protein (75 aa)
 
          0.627
RSAG_00764
Stage III sporulation protein AG (110 aa)
   
          0.627
RSAG_00691
Uncharacterized protein (341 aa)
   
          0.609
RSAG_01481
Uncharacterized protein (124 aa)
 
          0.543
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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