STRINGSTRING
RSAG_01498 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01498" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01498Uncharacterized protein (635 aa)    
Predicted Functional Partners:
RSAG_01497
Uncharacterized protein (272 aa)
 
  0.995
RSAG_02377
Uncharacterized protein (248 aa)
  0.971
gmk
GMP kinase ; Essential for recycling GMP and indirectly, cGMP (207 aa)
 
  0.854
RSAG_02897
Uncharacterized protein (671 aa)
 
 
0.838
RSAG_01176
Exonuclease SbcCD, D subunit (1275 aa)
     
  0.831
RSAG_01496
Uncharacterized protein (409 aa)
              0.824
rpoB
Transcriptase subunit beta ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1286 aa)
   
  0.815
RSAG_03292
Uncharacterized protein (195 aa)
   
  0.813
rpoC
Transcriptase subunit beta’ ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1251 aa)
   
    0.796
RSAG_00502
Uncharacterized protein (418 aa)
   
          0.778
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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