STRINGSTRING
RSAG_01540 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01540" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01540Uncharacterized protein (405 aa)    
Predicted Functional Partners:
RSAG_01539
Uncharacterized protein (298 aa)
 
  0.978
RSAG_01538
Uncharacterized protein (278 aa)
 
 
  0.969
RSAG_01889
Uncharacterized protein (298 aa)
 
  0.929
RSAG_02424
Uncharacterized protein (300 aa)
 
  0.923
RSAG_02009
Uncharacterized protein (280 aa)
 
 
  0.921
RSAG_02010
Uncharacterized protein (303 aa)
 
  0.919
RSAG_02297
Uncharacterized protein (302 aa)
 
  0.917
RSAG_01845
Uncharacterized protein (300 aa)
 
  0.916
RSAG_02741
Uncharacterized protein (293 aa)
 
  0.914
RSAG_02425
Uncharacterized protein (274 aa)
 
 
  0.913
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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