STRINGSTRING
RSAG_01546 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01546" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01546Uncharacterized protein (244 aa)    
Predicted Functional Partners:
RSAG_01547
Uncharacterized protein (310 aa)
              0.840
RSAG_03341
Uncharacterized protein (245 aa)
   
          0.773
RSAG_01545
Dihydroxy-acid dehydratase (581 aa)
          0.772
RSAG_03129
Uncharacterized protein (239 aa)
   
   
  0.649
RSAG_01543
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase (223 aa)
 
          0.623
RSAG_01544
Uncharacterized protein (358 aa)
 
 
      0.618
RSAG_02219
Aldehyde-alcohol dehydrogenase (885 aa)
   
 
  0.617
ilvC
Alpha-keto-beta-hydroxylacyl reductoisomerase (339 aa)
       
  0.612
RSAG_01945
Uncharacterized protein (480 aa)
     
 
  0.582
RSAG_00252
Aldehyde dehydrogenase (459 aa)
     
 
  0.582
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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