STRINGSTRING
RSAG_01548 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01548" - Glycerate kinase in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01548Glycerate kinase (378 aa)    
Predicted Functional Partners:
RSAG_01549
Uncharacterized protein (127 aa)
              0.824
RSAG_01093
Uncharacterized protein (329 aa)
   
 
  0.792
tadA
tRNA-specific adenosine deaminase ; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) (181 aa)
 
 
        0.763
RSAG_01945
Uncharacterized protein (480 aa)
       
  0.759
RSAG_00252
Aldehyde dehydrogenase (459 aa)
       
  0.759
RSAG_00353
Uncharacterized protein (387 aa)
       
  0.746
RSAG_02738
Uncharacterized protein (327 aa)
         
  0.746
RSAG_00980
Uncharacterized protein (163 aa)
         
  0.746
RSAG_02078
Uncharacterized protein (1039 aa)
   
 
  0.730
RSAG_03070
Uncharacterized protein (555 aa)
     
 
    0.612
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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