STRINGSTRING
RSAG_01556 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01556" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01556Uncharacterized protein (537 aa)    
Predicted Functional Partners:
RSAG_01557
Uncharacterized protein (610 aa)
 
   
  0.991
RSAG_01761
Uncharacterized protein (601 aa)
 
   
  0.936
RSAG_01843
Histidine kinase (599 aa)
 
   
  0.933
RSAG_01416
Uncharacterized protein (483 aa)
 
   
  0.919
RSAG_01962
Uncharacterized protein (548 aa)
 
   
  0.916
RSAG_01530
Uncharacterized protein (599 aa)
 
   
  0.911
RSAG_02077
Uncharacterized protein (579 aa)
 
   
  0.911
RSAG_01891
Uncharacterized protein (610 aa)
 
   
  0.897
RSAG_02006
Uncharacterized protein (595 aa)
 
   
  0.895
RSAG_01526
Uncharacterized protein (549 aa)
 
   
  0.892
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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