STRINGSTRING
RSAG_01559 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01559" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01559Uncharacterized protein (184 aa)    
Predicted Functional Partners:
RSAG_01560
TRAP transporter, DctM subunit (1110 aa)
 
          0.965
RSAG_01898
Uncharacterized protein (353 aa)
   
          0.729
RSAG_00461
Uncharacterized protein (432 aa)
   
          0.727
RSAG_03355
Uncharacterized protein (177 aa)
   
          0.690
RSAG_00508
Uncharacterized protein (673 aa)
   
          0.643
RSAG_03230
Uncharacterized protein (300 aa)
   
          0.642
RSAG_00837
Sigma-E processing peptidase SpoIIGA (285 aa)
   
          0.620
RSAG_03013
TRAP transporter, 4TM/12TM fusion protein (655 aa)
   
          0.596
RSAG_00228
Uncharacterized protein (635 aa)
   
          0.581
RSAG_02196
Uncharacterized protein (254 aa)
   
          0.580
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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