STRINGSTRING
RSAG_01561 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01561" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01561Uncharacterized protein (335 aa)    
Predicted Functional Partners:
RSAG_02083
Uncharacterized protein (57 aa)
   
          0.661
RSAG_03114
Uncharacterized protein (316 aa)
 
          0.614
RSAG_01282
Precorrin-6x reductase (683 aa)
 
     
  0.580
RSAG_02529
Uncharacterized protein (462 aa)
   
 
      0.576
RSAG_00022
Uncharacterized protein (365 aa)
   
          0.539
RSAG_03111
Peptidylprolyl isomerase (410 aa)
 
          0.530
RSAG_01563
Uncharacterized protein (577 aa)
   
        0.518
RSAG_01562
Uncharacterized protein (627 aa)
   
        0.518
RSAG_01648
Uncharacterized protein (137 aa)
         
  0.476
RSAG_02866
Peptidase M ; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed (251 aa)
     
      0.466
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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